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LOC112796156 probable galacturonosyltransferase 4 [ Arachis hypogaea (peanut) ]

Gene ID: 112796156, updated on 22-Oct-2023

Summary

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Gene symbol
LOC112796156
Gene description
probable galacturonosyltransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis hypogaea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC112796156 in Genome Data Viewer
Location:
chromosome: Arahy.04
Exon count:
5
Annotation release Status Assembly Chr Location
101 current arahy.Tifrunner.gnm1.KYV3 (GCF_003086295.2) Arahy.04 NC_037621.1 (8924088..8927380)

Chromosome Arahy.04 - NC_037621.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112796155 Neighboring gene protein DETOXIFICATION 18-like Neighboring gene peroxidase A2 Neighboring gene U3 snoRNP-associated protein-like EMB2271

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037621.1 Chromosome Arahy.04 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis hypogaea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Genomic

  1. NC_037621.1 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

    Range
    8924088..8927380
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025838481.2 → XP_025694266.1  probable galacturonosyltransferase 4

    UniProtKB/TrEMBL
    A0A445DIQ7
    Conserved Domains (1) summary
    PLN02829
    Location:1 → 392
    PLN02829; Probable galacturonosyltransferase
Nucleotide Protein
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