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LOC112783323 mediator of RNA polymerase II transcription subunit 23-like [ Arachis hypogaea (peanut) ]

Gene ID: 112783323, updated on 22-Oct-2023

Summary

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Gene symbol
LOC112783323
Gene description
mediator of RNA polymerase II transcription subunit 23-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis hypogaea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC112783323 in Genome Data Viewer
Location:
chromosome: Arahy.03
Exon count:
15
Annotation release Status Assembly Chr Location
101 current arahy.Tifrunner.gnm1.KYV3 (GCF_003086295.2) Arahy.03 NC_037620.1 (135752625..135762568)

Chromosome Arahy.03 - NC_037620.1Genomic Context describing neighboring genes Neighboring gene histone H1 Neighboring gene glucan endo-1,3-beta-glucosidase 3 Neighboring gene protein TIFY 6A Neighboring gene plant UBX domain-containing protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037620.1 Chromosome Arahy.03 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 23-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis hypogaea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Genomic

  1. NC_037620.1 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

    Range
    135752625..135762568
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029297485.1 → XP_029153318.1  LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 23-like

Nucleotide Protein
Heading Accession and Version

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