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LOC112775738 galacturonosyltransferase 8 [ Arachis hypogaea (peanut) ]

Gene ID: 112775738, updated on 22-Oct-2023

Summary

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Gene symbol
LOC112775738
Gene description
galacturonosyltransferase 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis hypogaea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC112775738 in Genome Data Viewer
Location:
chromosome: Arahy.19
Exon count:
3
Annotation release Status Assembly Chr Location
101 current arahy.Tifrunner.gnm1.KYV3 (GCF_003086295.2) Arahy.19 NC_037636.1 (14645834..14648681, complement)

Chromosome Arahy.19 - NC_037636.1Genomic Context describing neighboring genes Neighboring gene glycerol kinase Neighboring gene putative G3BP-like protein Neighboring gene prefoldin subunit 6 Neighboring gene uncharacterized LOC112775524

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037636.1 Chromosome Arahy.19 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparisons of de novo transcriptome assemblers in diploid and polyploid species using peanut (Arachis spp.) RNA-Seq data. Chopra R, et al. PLoS One, 2014. PMID 25551607, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galacturonosyltransferase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis hypogaea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Genomic

  1. NC_037636.1 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

    Range
    14645834..14648681 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025819567.1 → XP_025675352.1  galacturonosyltransferase 8

    UniProtKB/TrEMBL
    A0A445BN29, A0A6B9V8E4
    Conserved Domains (1) summary
    PLN02523
    Location:11 → 548
    PLN02523; galacturonosyltransferase
Nucleotide Protein
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