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LOC112775088 granule-bound starch synthase 1, chloroplastic/amyloplastic [ Arachis hypogaea (peanut) ]

Gene ID: 112775088, updated on 18-Sep-2024

Summary

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Gene symbol
LOC112775088
Gene description
granule-bound starch synthase 1, chloroplastic/amyloplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis hypogaea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC112775088 in Genome Data Viewer
Location:
chromosome: Arahy.19
Exon count:
15
Annotation release Status Assembly Chr Location
101 current arahy.Tifrunner.gnm1.KYV3 (GCF_003086295.2) Arahy.19 NC_037636.1 (97407425..97412210)

Chromosome Arahy.19 - NC_037636.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene uncharacterized LOC112778544 Neighboring gene small nucleolar RNA R71 Neighboring gene uncharacterized LOC112778545 Neighboring gene uncharacterized LOC112777263

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037636.1 Chromosome Arahy.19 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
granule-bound starch synthase 1, chloroplastic/amyloplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis hypogaea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Genomic

  1. NC_037636.1 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

    Range
    97407425..97412210
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025818555.2 → XP_025674340.1  granule-bound starch synthase 1, chloroplastic/amyloplastic

    UniProtKB/TrEMBL
    A0A444XNY5, A0A444XNZ2
    Conserved Domains (1) summary
    cd03791
    Location:88 → 585
    GT5_Glycogen_synthase_DULL1-like; Glycogen synthase GlgA and similar proteins

  2. XM_025818557.2 → XP_025674342.1  granule-bound starch synthase 1, chloroplastic/amyloplastic

    UniProtKB/TrEMBL
    A0A444XNY5, A0A444XNZ2
    Conserved Domains (1) summary
    cd03791
    Location:88 → 585
    GT5_Glycogen_synthase_DULL1-like; Glycogen synthase GlgA and similar proteins

  3. XM_025818556.2 → XP_025674341.1  granule-bound starch synthase 1, chloroplastic/amyloplastic

    UniProtKB/TrEMBL
    A0A444XNY5, A0A444XNZ2
    Conserved Domains (1) summary
    cd03791
    Location:88 → 585
    GT5_Glycogen_synthase_DULL1-like; Glycogen synthase GlgA and similar proteins
Nucleotide Protein
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