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LOC112772688 phosphatidylinositol N-acetylglucosaminyltransferase subunit A [ Arachis hypogaea (peanut) ]

Gene ID: 112772688, updated on 22-Oct-2023

Summary

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Gene symbol
LOC112772688
Gene description
phosphatidylinositol N-acetylglucosaminyltransferase subunit A
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis hypogaea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC112772688 in Genome Data Viewer
Location:
chromosome: Arahy.18
Exon count:
9
Annotation release Status Assembly Chr Location
101 current arahy.Tifrunner.gnm1.KYV3 (GCF_003086295.2) Arahy.18 NC_037635.1 (109605582..109609150)

Chromosome Arahy.18 - NC_037635.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene 40S ribosomal protein SA-like Neighboring gene gibberellin-regulated protein 6 Neighboring gene uncharacterized LOC112770258

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037635.1 Chromosome Arahy.18 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparisons of de novo transcriptome assemblers in diploid and polyploid species using peanut (Arachis spp.) RNA-Seq data. Chopra R, et al. PLoS One, 2014. PMID 25551607, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol N-acetylglucosaminyltransferase subunit A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis hypogaea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Genomic

  1. NC_037635.1 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

    Range
    109605582..109609150
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025817658.2 → XP_025673443.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit A isoform X1

    UniProtKB/TrEMBL
    A0A444Y1Y3, A0A445CQ40
    Conserved Domains (1) summary
    cd03796
    Location:7 → 402
    GT4_PIG-A-like; phosphatidylinositol N-acetylglucosaminyltransferase subunit A and similar proteins

  2. XM_025817659.2 → XP_025673444.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit A isoform X2

    UniProtKB/TrEMBL
    A0A444Y225
    Conserved Domains (1) summary
    cd03796
    Location:7 → 352
    GT1_PIG-A_like; This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate ...

RNA

  1. XR_003187598.2 RNA Sequence

Nucleotide Protein
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