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LOC112771815 hydroxyproline O-arabinosyltransferase 3 [ Arachis hypogaea (peanut) ]

Gene ID: 112771815, updated on 22-Oct-2023

Summary

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Gene symbol
LOC112771815
Gene description
hydroxyproline O-arabinosyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis hypogaea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC112771815 in Genome Data Viewer
Location:
chromosome: Arahy.18
Exon count:
11
Annotation release Status Assembly Chr Location
101 current arahy.Tifrunner.gnm1.KYV3 (GCF_003086295.2) Arahy.18 NC_037635.1 (121904210..121911436)

Chromosome Arahy.18 - NC_037635.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112770397 Neighboring gene protein ENHANCED DOWNY MILDEW 2 Neighboring gene uncharacterized LOC112771680 Neighboring gene aspartyl protease AED3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037635.1 Chromosome Arahy.18 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparisons of de novo transcriptome assemblers in diploid and polyploid species using peanut (Arachis spp.) RNA-Seq data. Chopra R, et al. PLoS One, 2014. PMID 25551607, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-arabinosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis hypogaea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Genomic

  1. NC_037635.1 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

    Range
    121904210..121911436
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025816628.2 → XP_025672413.1  hydroxyproline O-arabinosyltransferase 3

    UniProtKB/TrEMBL
    A0A445C049

  2. XM_025816629.2 → XP_025672414.1  hydroxyproline O-arabinosyltransferase 3

    UniProtKB/TrEMBL
    A0A445C049

  3. XM_025816630.2 → XP_025672415.1  hydroxyproline O-arabinosyltransferase 3

    UniProtKB/TrEMBL
    A0A445C049

  4. XM_025816631.2 → XP_025672416.1  hydroxyproline O-arabinosyltransferase 3

    UniProtKB/TrEMBL
    A0A445C049

  5. XM_025816633.2 → XP_025672418.1  hydroxyproline O-arabinosyltransferase 3

    UniProtKB/TrEMBL
    A0A445C049
Nucleotide Protein
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