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LOC112765392 F-box protein GID2 [ Arachis hypogaea (peanut) ]

Gene ID: 112765392, updated on 22-Oct-2023

Summary

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Gene symbol
LOC112765392
Gene description
F-box protein GID2
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis hypogaea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC112765392 in Genome Data Viewer
Location:
chromosome: Arahy.17
Exon count:
1
Annotation release Status Assembly Chr Location
101 current arahy.Tifrunner.gnm1.KYV3 (GCF_003086295.2) Arahy.17 NC_037634.1 (134634069..134635193)

Chromosome Arahy.17 - NC_037634.1Genomic Context describing neighboring genes Neighboring gene WD40 repeat-containing protein HOS15-like Neighboring gene MFP1 attachment factor 1 Neighboring gene protein MRG2 Neighboring gene putative receptor protein kinase ZmPK1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037634.1 Chromosome Arahy.17 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box protein GID2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis hypogaea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Genomic

  1. NC_037634.1 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

    Range
    134634069..134635193
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025811295.2 → XP_025667080.1  F-box protein GID2

    UniProtKB/TrEMBL
    A0A445C8G5
    Conserved Domains (1) summary
    pfam12937
    Location:45 → 82
    F-box-like
Nucleotide Protein
Heading Accession and Version

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