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LOC112750375 beta-1,3-galactosyltransferase GALT1 [ Arachis hypogaea (peanut) ]

Gene ID: 112750375, updated on 22-Oct-2023

Summary

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Gene symbol
LOC112750375
Gene description
beta-1,3-galactosyltransferase GALT1
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis hypogaea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC112750375 in Genome Data Viewer
Location:
chromosome: Arahy.15
Exon count:
9
Annotation release Status Assembly Chr Location
101 current arahy.Tifrunner.gnm1.KYV3 (GCF_003086295.2) Arahy.15 NC_037632.1 (74156144..74161784)

Chromosome Arahy.15 - NC_037632.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene small nucleolar RNA R71 Neighboring gene 50S ribosomal protein L18 Neighboring gene small nucleolar RNA R71

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037632.1 Chromosome Arahy.15 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:N-glycan beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase GALT1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis hypogaea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Genomic

  1. NC_037632.1 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

    Range
    74156144..74161784
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025799082.2 → XP_025654867.1  beta-1,3-galactosyltransferase GALT1 isoform X3

    Conserved Domains (1) summary
    PLN03133
    Location:33 → 635
    PLN03133; beta-1,3-galactosyltransferase; Provisional

  2. XM_025799081.2 → XP_025654866.1  beta-1,3-galactosyltransferase GALT1 isoform X2

    Conserved Domains (1) summary
    PLN03133
    Location:22 → 660
    PLN03133; beta-1,3-galactosyltransferase; Provisional

  3. XM_025799080.2 → XP_025654865.1  beta-1,3-galactosyltransferase GALT1 isoform X1

    Conserved Domains (1) summary
    PLN03133
    Location:33 → 671
    PLN03133; beta-1,3-galactosyltransferase; Provisional
Nucleotide Protein
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