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LOC112747573 alkylated DNA repair protein ALKBH8 homolog [ Arachis hypogaea (peanut) ]

Gene ID: 112747573, updated on 22-Oct-2023

Summary

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Gene symbol
LOC112747573
Gene description
alkylated DNA repair protein ALKBH8 homolog
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis hypogaea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC112747573 in Genome Data Viewer
Location:
chromosome: Arahy.15
Exon count:
9
Annotation release Status Assembly Chr Location
101 current arahy.Tifrunner.gnm1.KYV3 (GCF_003086295.2) Arahy.15 NC_037632.1 (2697151..2702368, complement)

Chromosome Arahy.15 - NC_037632.1Genomic Context describing neighboring genes Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At3g47570 Neighboring gene beta-amylase 8-like Neighboring gene putative receptor-like protein kinase At3g47110 Neighboring gene rop guanine nucleotide exchange factor 14-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037632.1 Chromosome Arahy.15 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in oxidative demethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkylated DNA repair protein ALKBH8 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis hypogaea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Genomic

  1. NC_037632.1 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

    Range
    2697151..2702368 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029293088.1 → XP_029148921.1  alkylated DNA repair protein ALKBH8 homolog isoform X3

    Conserved Domains (1) summary
    cl17169
    Location:19 → 101
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_029293087.1 → XP_029148920.1  alkylated DNA repair protein ALKBH8 homolog isoform X1

    Conserved Domains (2) summary
    cl17169
    Location:19 → 101
    RRM_SF; RNA recognition motif (RRM) superfamily
    cl21496
    Location:120 → 323
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

  3. XM_025795659.2 → XP_025651444.1  alkylated DNA repair protein ALKBH8 homolog isoform X2

    Conserved Domains (2) summary
    cl17169
    Location:19 → 101
    RRM_SF; RNA recognition motif (RRM) superfamily
    cl21496
    Location:120 → 323
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
Nucleotide Protein
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