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LOC112733086 callose synthase 5 [ Arachis hypogaea (peanut) ]

Gene ID: 112733086, updated on 22-Oct-2023

Summary

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Gene symbol
LOC112733086
Gene description
callose synthase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis hypogaea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC112733086 in Genome Data Viewer
Location:
chromosome: Arahy.13
Exon count:
42
Annotation release Status Assembly Chr Location
101 current arahy.Tifrunner.gnm1.KYV3 (GCF_003086295.2) Arahy.13 NC_037630.1 (123280540..123295153)

Chromosome Arahy.13 - NC_037630.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112733084 Neighboring gene uncharacterized LOC112733085 Neighboring gene uncharacterized LOC112735346 Neighboring gene phytochrome A-like Neighboring gene probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037630.1 Chromosome Arahy.13 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis hypogaea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Genomic

  1. NC_037630.1 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

    Range
    123280540..123295153
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025781954.1 → XP_025637739.1  callose synthase 5

    UniProtKB/TrEMBL
    A0A444ZYB2
    Conserved Domains (4) summary
    pfam02364
    Location:1035 → 1780
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:47 → 154
    Vta1; Vta1 like
    pfam14288
    Location:322 → 435
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
    cl17210
    Location:884 → 1006
    OSCP; ATP synthase delta (OSCP) subunit
Nucleotide Protein
Heading Accession and Version

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