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LOC112728026 protein SLE2 [ Arachis hypogaea (peanut) ]

Gene ID: 112728026, updated on 22-Oct-2023

Summary

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Gene symbol
LOC112728026
Gene description
protein SLE2
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis hypogaea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC112728026 in Genome Data Viewer
Location:
chromosome: Arahy.12
Exon count:
2
Annotation release Status Assembly Chr Location
101 current arahy.Tifrunner.gnm1.KYV3 (GCF_003086295.2) Arahy.12 NC_037629.1 (104970985..104971771, complement)

Chromosome Arahy.12 - NC_037629.1Genomic Context describing neighboring genes Neighboring gene chlorophyll synthase, chloroplastic Neighboring gene receptor like protein 26-like Neighboring gene uncharacterized LOC112730427 Neighboring gene uncharacterized LOC112729360

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037629.1 Chromosome Arahy.12 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Water deficit induces variation in expression of stress-responsive genes in two peanut (Arachis hypogaea L.) cultivars with different tolerance to drought. Dramé KN, et al. Plant Physiol Biochem, 2007 Mar-Apr. PMID 17433701
  2. A high-density genetic map of Arachis duranensis, a diploid ancestor of cultivated peanut. Nagy ED, et al. BMC Genomics, 2012 Sep 11. PMID 22967170, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in response to abscisic acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein SLE2
Names
lea protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis hypogaea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Genomic

  1. NC_037629.1 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

    Range
    104970985..104971771 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025778001.1 → XP_025633786.1  protein SLE2

    UniProtKB/TrEMBL
    Q45W85
    Conserved Domains (1) summary
    pfam00477
    Location:1 → 89
    LEA_5; Small hydrophilic plant seed protein
Nucleotide Protein
Heading Accession and Version

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