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LOC112709234 rhamnogalacturonan I rhamnosyltransferase 1 [ Arachis hypogaea (peanut) ]

Gene ID: 112709234, updated on 22-Oct-2023

Summary

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Gene symbol
LOC112709234
Gene description
rhamnogalacturonan I rhamnosyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis hypogaea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC112709234 in Genome Data Viewer
Location:
chromosome: Arahy.01
Exon count:
9
Annotation release Status Assembly Chr Location
101 current arahy.Tifrunner.gnm1.KYV3 (GCF_003086295.2) Arahy.01 NC_037618.1 (109214281..109217837, complement)

Chromosome Arahy.01 - NC_037618.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112771867 Neighboring gene transcription factor BIM1 Neighboring gene small nucleolar RNA R71 Neighboring gene uncharacterized LOC112709242

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037618.1 Chromosome Arahy.01 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rhamnogalacturonan I rhamnosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis hypogaea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Genomic

  1. NC_037618.1 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

    Range
    109214281..109217837 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025761131.2 → XP_025616916.1  rhamnogalacturonan I rhamnosyltransferase 1

    UniProtKB/TrEMBL
    A0A445EJX8
    Conserved Domains (1) summary
    cd11299
    Location:125 → 450
    O-FucT_plant; GDP-fucose protein O-fucosyltransferase, plant specific subfamily

RNA

  1. XR_003156507.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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