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LOC112708263 probable galacturonosyltransferase-like 1 [ Arachis hypogaea (peanut) ]

Gene ID: 112708263, updated on 22-Oct-2023

Summary

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Gene symbol
LOC112708263
Gene description
probable galacturonosyltransferase-like 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis hypogaea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC112708263 in Genome Data Viewer
Location:
chromosome: Arahy.08
Exon count:
1
Annotation release Status Assembly Chr Location
101 current arahy.Tifrunner.gnm1.KYV3 (GCF_003086295.2) Arahy.08 NC_037625.1 (51644338..51646349)

Chromosome Arahy.08 - NC_037625.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112708261 Neighboring gene E3 ubiquitin-protein ligase RNF185 Neighboring gene probable calcium-binding protein CML41 Neighboring gene lysM domain receptor-like kinase 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037625.1 Chromosome Arahy.08 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparisons of de novo transcriptome assemblers in diploid and polyploid species using peanut (Arachis spp.) RNA-Seq data. Chopra R, et al. PLoS One, 2014. PMID 25551607, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis hypogaea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Genomic

  1. NC_037625.1 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

    Range
    51644338..51646349
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025760448.2 → XP_025616233.1  probable galacturonosyltransferase-like 1

    UniProtKB/TrEMBL
    A0A445CBQ2, A0A445EJ49
    Conserved Domains (1) summary
    pfam01501
    Location:166 → 420
    Glyco_transf_8; Glycosyl transferase family 8
Nucleotide Protein
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