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LOC112708219 galactoside 2-alpha-L-fucosyltransferase [ Arachis hypogaea (peanut) ]

Gene ID: 112708219, updated on 22-Oct-2023

Summary

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Gene symbol
LOC112708219
Gene description
galactoside 2-alpha-L-fucosyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis hypogaea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC112708219 in Genome Data Viewer
Location:
chromosome: Arahy.08
Exon count:
2
Annotation release Status Assembly Chr Location
101 current arahy.Tifrunner.gnm1.KYV3 (GCF_003086295.2) Arahy.08 NC_037625.1 (51161412..51163565)

Chromosome Arahy.08 - NC_037625.1Genomic Context describing neighboring genes Neighboring gene vesicle transport v-SNARE 11-like Neighboring gene pentatricopeptide repeat-containing protein At5g61400-like Neighboring gene putative pentatricopeptide repeat-containing protein At1g74400 Neighboring gene peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 Neighboring gene uncharacterized LOC112708223 Neighboring gene transcription factor MYB106

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037625.1 Chromosome Arahy.08 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparisons of de novo transcriptome assemblers in diploid and polyploid species using peanut (Arachis spp.) RNA-Seq data. Chopra R, et al. PLoS One, 2014. PMID 25551607, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactoside 2-alpha-L-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xyloglucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactoside 2-alpha-L-fucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis hypogaea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Genomic

  1. NC_037625.1 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

    Range
    51161412..51163565
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025760401.1 → XP_025616186.1  galactoside 2-alpha-L-fucosyltransferase

    UniProtKB/TrEMBL
    A0A445C289
    Conserved Domains (1) summary
    cl16914
    Location:66 → 504
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins
Nucleotide Protein
Heading Accession and Version

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