U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PTGS1 prostaglandin-endoperoxide synthase 1 [ Canis lupus dingo (dingo) ]

Gene ID: 112677161, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
PTGS1
Gene description
prostaglandin-endoperoxide synthase 1
See related
Ensembl:ENSCAFG00020015185
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PTGS1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
12
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 9 NC_064251.1 (61479142..61500991, complement)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 9 Unlocalized Scaffold NW_023365136.1 (62258267..62280114, complement)

Chromosome 9 - NC_064251.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 1L3-like Neighboring gene ATP synthase subunit gamma, mitochondrial-like Neighboring gene mitochondrial ribosome recycling factor Neighboring gene RNA binding motif protein 18 Neighboring gene MORN repeat containing 5 Neighboring gene LIM homeobox 6

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables prostaglandin-endoperoxide synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cyclooxygenase pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
prostaglandin G/H synthase 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064251.1 Reference ASM325472v2

    Range
    61479142..61500991 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035720875.2 → XP_035576768.1  prostaglandin G/H synthase 1 isoform X4

    UniProtKB/Swiss-Prot
    F1PBX3, Q8HZR0, Q8HZR1
    Conserved Domains (2) summary
    cd09816
    Location:93 → 579
    prostaglandin_endoperoxide_synthase; Animal prostaglandin endoperoxide synthase and related bacterial proteins
    cd00054
    Location:36 → 73
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...

  2. XM_025475037.3 → XP_025330822.1  prostaglandin G/H synthase 1 isoform X3

    UniProtKB/Swiss-Prot
    F1PBX3, Q8HZR0, Q8HZR1
    Conserved Domains (2) summary
    cd09816
    Location:93 → 585
    prostaglandin_endoperoxide_synthase; Animal prostaglandin endoperoxide synthase and related bacterial proteins
    cd00054
    Location:36 → 73
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...

  3. XM_049114479.1 → XP_048970436.1  prostaglandin G/H synthase 1 isoform X5

  4. XM_025475035.3 → XP_025330820.1  prostaglandin G/H synthase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0M635, A0A8I3NTG8
    Conserved Domains (2) summary
    cd09816
    Location:123 → 615
    prostaglandin_endoperoxide_synthase; Animal prostaglandin endoperoxide synthase and related bacterial proteins
    cd00054
    Location:66 → 103
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...

  5. XM_049114480.1 → XP_048970437.1  prostaglandin G/H synthase 1 isoform X6

  6. XM_025475036.3 → XP_025330821.1  prostaglandin G/H synthase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0M635, A0A8I3NTG8
    Conserved Domains (2) summary
    cd09816
    Location:123 → 609
    prostaglandin_endoperoxide_synthase; Animal prostaglandin endoperoxide synthase and related bacterial proteins
    cd00054
    Location:66 → 103
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...

  7. XM_025475040.3 → XP_025330825.1  prostaglandin G/H synthase 1 isoform X7

    UniProtKB/TrEMBL
    A0A8C0Q9L9, A0A8P0TAE2
    Related
    ENSCAFP00020019150.1
    Conserved Domains (2) summary
    cd09816
    Location:60 → 552
    prostaglandin_endoperoxide_synthase; Animal prostaglandin endoperoxide synthase and related bacterial proteins
    cd00054
    Location:4 → 40
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...

  8. XM_025475041.3 → XP_025330826.1  prostaglandin G/H synthase 1 isoform X8

    UniProtKB/TrEMBL
    A0A8C0KR96
    Related
    ENSCAFP00020019181.1
    Conserved Domains (1) summary
    cd09816
    Location:2 → 472
    prostaglandin_endoperoxide_synthase; Animal prostaglandin endoperoxide synthase and related bacterial proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.