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HACD2 3-hydroxyacyl-CoA dehydratase 2 [ Canis lupus dingo (dingo) ]

Gene ID: 112677157, updated on 10-Oct-2024

Summary

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Gene symbol
HACD2
Gene description
3-hydroxyacyl-CoA dehydratase 2
See related
Ensembl:ENSCAFG00020004769
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See HACD2 in Genome Data Viewer
Location:
chromosome: 33
Exon count:
7
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 33 NC_064275.1 (26725434..26836778, complement)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 33 Unlocalized Scaffold NW_023365235.1 (26861112..26972345, complement)

Chromosome 33 - NC_064275.1Genomic Context describing neighboring genes Neighboring gene adenylate cyclase 5 Neighboring gene uncharacterized LOC118353158 Neighboring gene uncharacterized LOC125754249 Neighboring gene uncharacterized LOC112677162 Neighboring gene uncharacterized LOC118353161 Neighboring gene myosin light chain kinase Neighboring gene uncharacterized LOC118353163

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-hydroxyacyl-CoA dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064275.1 Reference ASM325472v2

    Range
    26725434..26836778 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025475030.3 → XP_025330815.3  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2

    UniProtKB/TrEMBL
    A0A8C0JV96
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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