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HOGA1 4-hydroxy-2-oxoglutarate aldolase 1 [ Canis lupus dingo (dingo) ]

Gene ID: 112672141, updated on 15-Mar-2024

Summary

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Gene symbol
HOGA1
Gene description
4-hydroxy-2-oxoglutarate aldolase 1
See related
Ensembl:ENSCAFG00020006037
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See HOGA1 in Genome Data Viewer
Location:
chromosome: 28
Exon count:
7
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 28 NC_064270.1 (10969650..10993980)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 28 Unlocalized Scaffold NW_023365220.1 (11312528..11339351)

Chromosome 28 - NC_064270.1Genomic Context describing neighboring genes Neighboring gene ubiquitin domain containing 1 Neighboring gene uncharacterized LOC118352617 Neighboring gene ankyrin repeat domain 2 Neighboring gene chromosome 28 C10orf62 homolog Neighboring gene MORN repeat containing 4 Neighboring gene phosphatidylinositol 4-kinase type 2 alpha Neighboring gene arginine vasopressin induced 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-hydroxy-tetrahydrodipicolinate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables N-acetylneuraminate lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylneuraminate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-hydroxy-2-oxoglutarate aldolase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064270.1 Reference ASM325472v2

    Range
    10969650..10993980
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025466797.3 → XP_025322582.1  4-hydroxy-2-oxoglutarate aldolase, mitochondrial

    UniProtKB/TrEMBL
    A0A8C0JZX1, A0A8C0TUY7
    Related
    ENSCAFP00020007467.1
    Conserved Domains (1) summary
    cd00408
    Location:38 → 321
    DHDPS-like; Dihydrodipicolinate synthase family
Nucleotide Protein
Heading Accession and Version

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