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CHAT choline O-acetyltransferase [ Canis lupus dingo (dingo) ]

Gene ID: 112671986, updated on 15-Mar-2024

Summary

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Gene symbol
CHAT
Gene description
choline O-acetyltransferase
See related
Ensembl:ENSCAFG00020025085
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See CHAT in Genome Data Viewer
Location:
chromosome: 28
Exon count:
18
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 28 NC_064270.1 (1552936..1605837)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 28 Unlocalized Scaffold NW_023365220.1 (1869341..1922140)

Chromosome 28 - NC_064270.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112671982 Neighboring gene dorsal root ganglia homeobox Neighboring gene ERCC excision repair 6, chromatin remodeling factor Neighboring gene thymosin beta-4-like Neighboring gene solute carrier family 18 member A3 Neighboring gene mitochondrial import inner membrane translocase subunit TIM14-like Neighboring gene chromosome 28 C10orf53 homolog Neighboring gene ATP synthase F(0) complex subunit C2, mitochondrial-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline O-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetylcholine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuromuscular synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: choline O-acetyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064270.1 Reference ASM325472v2

    Range
    1552936..1605837
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035707620.2 → XP_035563513.1  LOW QUALITY PROTEIN: choline O-acetyltransferase

    Conserved Domains (1) summary
    pfam00755
    Location:204 → 783
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
Nucleotide Protein
Heading Accession and Version

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