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B3GAT1 beta-1,3-glucuronyltransferase 1 [ Canis lupus dingo (dingo) ]

Gene ID: 112671025, updated on 15-Mar-2024

Summary

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Gene symbol
B3GAT1
Gene description
beta-1,3-glucuronyltransferase 1
See related
Ensembl:ENSCAFG00020007877
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See B3GAT1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 5 NC_064247.1 (734172..758833)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 5 Unlocalized Scaffold NW_023365093.1 (824338..849028)

Chromosome 5 - NC_064247.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112671022 Neighboring gene uncharacterized LOC118354661 Neighboring gene uncharacterized LOC112671023 Neighboring gene beta-galactosidase-1-like protein 2 Neighboring gene uncharacterized LOC118354662 Neighboring gene uncharacterized LOC112671026

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064247.1 Reference ASM325472v2

    Range
    734172..758833
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025464840.3 → XP_025320625.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0K1Z4
    Related
    ENSCAFP00020009686.1
    Conserved Domains (1) summary
    pfam03360
    Location:105 → 315
    Glyco_transf_43; Glycosyltransferase family 43

  2. XM_025464836.3 → XP_025320621.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0RAK2
    Conserved Domains (1) summary
    pfam03360
    Location:118 → 328
    Glyco_transf_43; Glycosyltransferase family 43

  3. XM_025464841.3 → XP_025320626.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0K1Z4
    Conserved Domains (1) summary
    pfam03360
    Location:105 → 315
    Glyco_transf_43; Glycosyltransferase family 43

  4. XM_025464838.3 → XP_025320623.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0RAK2
    Conserved Domains (1) summary
    pfam03360
    Location:118 → 328
    Glyco_transf_43; Glycosyltransferase family 43
Nucleotide Protein
Heading Accession and Version

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