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XYLB xylulokinase [ Canis lupus dingo (dingo) ]

Gene ID: 112668755, updated on 11-Apr-2024

Summary

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Gene symbol
XYLB
Gene description
xylulokinase
See related
Ensembl:ENSCAFG00020000110
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See XYLB in Genome Data Viewer
Location:
chromosome: 23
Exon count:
20
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 23 NC_064265.1 (8201116..8254414)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 23 Unlocalized Scaffold NW_023365204.1 (8774965..8825227)

Chromosome 23 - NC_064265.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125753418 Neighboring gene solute carrier family 22 member 13 Neighboring gene solute carrier family 22 member 14 Neighboring gene activin A receptor type 2B Neighboring gene exo/endonuclease G Neighboring gene uncharacterized LOC125753463

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-xylulokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-xylose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xylulose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xylulose kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064265.1 Reference ASM325472v2

    Range
    8201116..8254414
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025461273.3 → XP_025317058.1  xylulose kinase isoform X1

    UniProtKB/TrEMBL
    A0A8C0JJY2, A0A8C0T1A4
    Related
    ENSCAFP00020000583.1
    Conserved Domains (1) summary
    cd07776
    Location:9 → 479
    FGGY_D-XK_euk; eukaryotic D-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases

  2. XM_025461274.3 → XP_025317059.1  xylulose kinase isoform X2

    UniProtKB/TrEMBL
    A0A8C0JGN9
    Related
    ENSCAFP00020000589.1
    Conserved Domains (1) summary
    cd07776
    Location:1 → 413
    FGGY_D-XK_euk; eukaryotic D-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases

  3. XM_035704846.2 → XP_035560739.1  xylulose kinase isoform X3

    UniProtKB/TrEMBL
    A0A8C0JGN9
    Conserved Domains (1) summary
    cd07776
    Location:1 → 401
    FGGY_D-XK_euk; eukaryotic D-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases

RNA

  1. XR_003141857.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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