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B3GALT1 beta-1,3-galactosyltransferase 1 [ Canis lupus dingo (dingo) ]

Gene ID: 112668039, updated on 15-Mar-2024

Summary

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Gene symbol
B3GALT1
Gene description
beta-1,3-galactosyltransferase 1
See related
Ensembl:ENSCAFG00020002091
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See B3GALT1 in Genome Data Viewer
Location:
chromosome: 36
Exon count:
5
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 36 NC_064278.1 (12430248..12933366)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 36 NC_049958.1 (12433162..12936661)

Chromosome 36 - NC_064278.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125754462 Neighboring gene uncharacterized LOC118350595 Neighboring gene xin actin binding repeat containing 2 Neighboring gene ATP synthase subunit d, mitochondrial-like Neighboring gene uncharacterized LOC112668040 Neighboring gene uncharacterized LOC118350600 Neighboring gene uncharacterized LOC112668045 Neighboring gene uncharacterized LOC112668046 Neighboring gene serine/threonine kinase 39

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064278.1 Reference ASM325472v2

    Range
    12430248..12933366
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025460053.3 → XP_025315838.1  beta-1,3-galactosyltransferase 1

    UniProtKB/TrEMBL
    A0A8C0JLC3, A0A8C0TY66
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 279
    Galactosyl_T; Galactosyltransferase

  2. XM_025460054.3 → XP_025315839.1  beta-1,3-galactosyltransferase 1

    UniProtKB/TrEMBL
    A0A8C0JLC3, A0A8C0TY66
    Related
    ENSCAFP00020002471.1
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 279
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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