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PARVA parvin alpha [ Canis lupus dingo (dingo) ]

Gene ID: 112667646, updated on 15-Mar-2024

Summary

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Gene symbol
PARVA
Gene description
parvin alpha
See related
Ensembl:ENSCAFG00020016402
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See PARVA in Genome Data Viewer
Location:
chromosome: 21
Exon count:
13
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 21 NC_064263.1 (35895054..36061133)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 21 Unlocalized Scaffold NW_023365195.1 (36342626..36509728)

Chromosome 21 - NC_064263.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112667643 Neighboring gene uncharacterized LOC112667645 Neighboring gene microtubule associated monooxygenase, calponin and LIM domain containing 2 Neighboring gene U6 spliceosomal RNA Neighboring gene TEA domain transcription factor 1 Neighboring gene uncharacterized LOC118351773 Neighboring gene Ras association domain family member 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment or maintenance of cell polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in substrate adhesion-dependent cell spreading IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: alpha-parvin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064263.1 Reference ASM325472v2

    Range
    35895054..36061133
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025459516.3 → XP_025315301.1  LOW QUALITY PROTEIN: alpha-parvin

    UniProtKB/TrEMBL
    A0A8C0KVC2, A0A8C0PPC7, A0A8I3NY32
    Related
    ENSCAFP00020020721.1
    Conserved Domains (2) summary
    cd21335
    Location:91 → 205
    CH_PARVA_rpt1; first calponin homology (CH) domain found in alpha-parvin
    cd21337
    Location:244 → 372
    CH_PARVA_rpt2; second calponin homology (CH) domain found in alpha-parvin
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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