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PRKCSH PRKCSH beta subunit of glucosidase II [ Canis lupus dingo (dingo) ]

Gene ID: 112666544, updated on 15-Mar-2024

Summary

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Gene symbol
PRKCSH
Gene description
PRKCSH beta subunit of glucosidase II
See related
Ensembl:ENSCAFG00020004589
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See PRKCSH in Genome Data Viewer
Location:
chromosome: 20
Exon count:
19
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 20 NC_064262.1 (50194965..50206757, complement)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 20 Unlocalized Scaffold NW_023365191.1 (50459319..50471117, complement)

Chromosome 20 - NC_064262.1Genomic Context describing neighboring genes Neighboring gene ECSIT signaling integrator Neighboring gene zinc finger protein 653 Neighboring gene ELAV like RNA binding protein 3 Neighboring gene uncharacterized LOC112666546 Neighboring gene outer dynein arm docking complex subunit 3 Neighboring gene uncharacterized LOC112666547 Neighboring gene ral guanine nucleotide dissociation stimulator like 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in liver development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glucosidase II complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucosidase 2 subunit beta
Names
protein kinase C substrate 80K-H

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064262.1 Reference ASM325472v2

    Range
    50194965..50206757 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025457623.3 → XP_025313408.1  glucosidase 2 subunit beta isoform X2

    UniProtKB/TrEMBL
    A0A8I3P6Y9, A0A8P0PKC6
    Conserved Domains (2) summary
    pfam12999
    Location:20 → 162
    PRKCSH-like; Glucosidase II beta subunit-like
    cl06793
    Location:382 → 510
    PRKCSH; Glucosidase II beta subunit-like protein

  2. XM_025457621.3 → XP_025313406.1  glucosidase 2 subunit beta isoform X1

    UniProtKB/TrEMBL
    A0A8C0JSX3, A0A8C0NY04, A0A8I3P6Y9, A0A8I3S0P1, A0A8P0PKC6
    Conserved Domains (2) summary
    pfam12999
    Location:20 → 162
    PRKCSH-like; Glucosidase II beta subunit-like
    cl06793
    Location:389 → 517
    PRKCSH; Glucosidase II beta subunit-like protein

  3. XM_025457619.3 → XP_025313404.1  glucosidase 2 subunit beta isoform X1

    UniProtKB/TrEMBL
    A0A8C0JSX3, A0A8C0NY04, A0A8I3P6Y9, A0A8I3S0P1, A0A8P0PKC6
    Related
    ENSCAFP00020005635.1
    Conserved Domains (2) summary
    pfam12999
    Location:20 → 162
    PRKCSH-like; Glucosidase II beta subunit-like
    cl06793
    Location:389 → 517
    PRKCSH; Glucosidase II beta subunit-like protein

  4. XM_025457620.3 → XP_025313405.1  glucosidase 2 subunit beta isoform X1

    UniProtKB/TrEMBL
    A0A8C0JSX3, A0A8C0NY04, A0A8I3P6Y9, A0A8I3S0P1, A0A8P0PKC6
    Conserved Domains (2) summary
    pfam12999
    Location:20 → 162
    PRKCSH-like; Glucosidase II beta subunit-like
    cl06793
    Location:389 → 517
    PRKCSH; Glucosidase II beta subunit-like protein
Nucleotide Protein
Heading Accession and Version

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