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AMT aminomethyltransferase [ Canis lupus dingo (dingo) ]

Gene ID: 112665781, updated on 10-Oct-2024

Summary

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Gene symbol
AMT
Gene description
aminomethyltransferase
See related
Ensembl:ENSCAFG00020021037
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See AMT in Genome Data Viewer
Location:
chromosome: 20
Exon count:
11
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 20 NC_064262.1 (40080240..40086273)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 20 Unlocalized Scaffold NW_023365191.1 (40248813..40254854)

Chromosome 20 - NC_064262.1Genomic Context describing neighboring genes Neighboring gene bassoon presynaptic cytomatrix protein Neighboring gene dystroglycan 1 Neighboring gene uncharacterized LOC112665788 Neighboring gene nicolin 1, tubulin polyglutamylase complex subunit Neighboring gene uncharacterized LOC112665786 Neighboring gene T cell leukemia translocation altered Neighboring gene ras homolog family member A Neighboring gene glutathione peroxidase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aminomethyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aminomethyltransferase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064262.1 Reference ASM325472v2

    Range
    40080240..40086273
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049097962.1 → XP_048953919.1  aminomethyltransferase, mitochondrial isoform X1

  2. XM_049097963.1 → XP_048953920.1  aminomethyltransferase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8C0L8Z3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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