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SLC25A20 solute carrier family 25 member 20 [ Canis lupus dingo (dingo) ]

Gene ID: 112665761, updated on 15-Mar-2024

Summary

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Gene symbol
SLC25A20
Gene description
solute carrier family 25 member 20
See related
Ensembl:ENSCAFG00020020928
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See SLC25A20 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
10
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 20 NC_064262.1 (40509856..40536735)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 20 Unlocalized Scaffold NW_023365191.1 (40678197..40705009)

Chromosome 20 - NC_064262.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112665762 Neighboring gene ariadne RBR E3 ubiquitin protein ligase 2 Neighboring gene protein kinase cAMP-dependent type II regulatory subunit alpha Neighboring gene 40S ribosomal protein S4-like Neighboring gene uncharacterized LOC112665757

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables low-density lipoprotein particle binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of neuron projection development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064262.1 Reference ASM325472v2

    Range
    40509856..40536735
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025455779.3 → XP_025311564.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0L597, A0A8C0TDJ2, A0A8I3QW07, A0A8I3SCF5
    Related
    ENSCAFP00020026628.1
    Conserved Domains (1) summary
    pfam00153
    Location:106 → 198
    Mito_carr; Mitochondrial carrier protein

  2. XM_025455780.3 → XP_025311565.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X2

    UniProtKB/TrEMBL
    A0A8I3QW47
    Conserved Domains (1) summary
    pfam00153
    Location:56 → 148
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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