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POP1 POP1 homolog, ribonuclease P/MRP subunit [ Canis lupus dingo (dingo) ]

Gene ID: 112662033, updated on 15-Mar-2024

Summary

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Gene symbol
POP1
Gene description
POP1 homolog, ribonuclease P/MRP subunit
See related
Ensembl:ENSCAFG00020026765
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See POP1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
17
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 13 NC_064255.1 (496450..537258)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 13 NC_049956.1 (1706729..1752604)

Chromosome 13 - NC_064255.1Genomic Context describing neighboring genes Neighboring gene glutamate rich 5 Neighboring gene reactive intermediate imine deaminase A homolog Neighboring gene NIPA like domain containing 2 Neighboring gene uncharacterized LOC112662032 Neighboring gene uncharacterized LOC125752401 Neighboring gene uncharacterized LOC125752402

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in tRNA 5'-leader removal IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleolar ribonuclease P complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonuclease MRP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribonucleases P/MRP protein subunit POP1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064255.1 Reference ASM325472v2

    Range
    496450..537258
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035713642.2 → XP_035569535.1  ribonucleases P/MRP protein subunit POP1 isoform X4

    Conserved Domains (2) summary
    pfam06978
    Location:107 → 257
    POP1; Ribonucleases P/MRP protein subunit POP1
    pfam08170
    Location:618 → 709
    POPLD; POPLD (NUC188) domain

  2. XM_025450328.3 → XP_025306113.1  ribonucleases P/MRP protein subunit POP1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NT73, A0A8P0NR68
    Conserved Domains (2) summary
    pfam06978
    Location:107 → 257
    POP1; Ribonucleases P/MRP protein subunit POP1
    pfam08170
    Location:618 → 709
    POPLD; POPLD (NUC188) domain

  3. XM_025450327.3 → XP_025306112.1  ribonucleases P/MRP protein subunit POP1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0NT73, A0A8C0YX55, A0A8P0NR68
    Conserved Domains (2) summary
    pfam06978
    Location:107 → 257
    POP1; Ribonucleases P/MRP protein subunit POP1
    pfam08170
    Location:618 → 709
    POPLD; POPLD (NUC188) domain

  4. XM_025450326.3 → XP_025306111.1  ribonucleases P/MRP protein subunit POP1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0LQD5, A0A8C0NT73, A0A8C0YX84, A0A8I3S8R3, A0A8P0NR68
    Related
    ENSCAFP00020034498.1
    Conserved Domains (2) summary
    pfam06978
    Location:107 → 257
    POP1; Ribonucleases P/MRP protein subunit POP1
    pfam08170
    Location:616 → 707
    POPLD; POPLD (NUC188) domain
Nucleotide Protein
Heading Accession and Version

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