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SGCA sarcoglycan alpha [ Canis lupus dingo (dingo) ]

Gene ID: 112655146, updated on 15-Mar-2024

Summary

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Gene symbol
SGCA
Gene description
sarcoglycan alpha
See related
Ensembl:ENSCAFG00020023493
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See SGCA in Genome Data Viewer
Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 9 NC_064251.1 (27329860..27343333)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 9 Unlocalized Scaffold NW_023365136.1 (28024493..28037928)

Chromosome 9 - NC_064251.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112655055 Neighboring gene protein phosphatase 1 regulatory subunit 9B Neighboring gene uncharacterized LOC118355795 Neighboring gene uncharacterized LOC112655147 Neighboring gene collagen type I alpha 1 chain Neighboring gene small nucleolar RNA U2-19

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064251.1 Reference ASM325472v2

    Range
    27329860..27343333
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025440092.3 → XP_025295877.1  alpha-sarcoglycan

    UniProtKB/TrEMBL
    A0A8C0LDI2, A0A8C0SAC5, A0A8I3NCD7, A0A8I3RZD4, A0A8P0P5Y0
    Related
    ENSCAFP00020030144.1
    Conserved Domains (1) summary
    pfam05510
    Location:8 → 347
    Sarcoglycan_2; Sarcoglycan alpha/epsilon

  2. XM_025440093.3 → XP_025295878.1  alpha-sarcoglycan

    UniProtKB/TrEMBL
    A0A8C0LDI2, A0A8C0SAC5, A0A8I3NCD7, A0A8I3RZD4, A0A8P0P5Y0
    Conserved Domains (1) summary
    pfam05510
    Location:8 → 347
    Sarcoglycan_2; Sarcoglycan alpha/epsilon
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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