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TCAP titin-cap [ Canis lupus dingo (dingo) ]

Gene ID: 112655039, updated on 15-Mar-2024

Summary

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Gene symbol
TCAP
Gene description
titin-cap
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See TCAP in Genome Data Viewer
Location:
chromosome: 9
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 9 NC_064251.1 (23978737..23980268, complement)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 9 Unlocalized Scaffold NW_023365136.1 (24672924..24676216, complement)

Chromosome 9 - NC_064251.1Genomic Context describing neighboring genes Neighboring gene post-GPI attachment to proteins phospholipase 3 Neighboring gene phenylethanolamine N-methyltransferase Neighboring gene uncharacterized LOC112655040 Neighboring gene StAR related lipid transfer domain containing 3 Neighboring gene uncharacterized LOC125755825

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-macromolecule adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of muscle IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables titin Z domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables titin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiac muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cardiac muscle tissue morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cardiac myofibril assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in detection of muscle stretch IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sarcomerogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in skeletal muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in skeletal muscle myosin thick filament assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in skeletal muscle thin filament assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
telethonin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064251.1 Reference ASM325472v2

    Range
    23978737..23980268 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025439775.3 → XP_025295560.1  telethonin

    UniProtKB/TrEMBL
    A0A8C0MZS1, A0A8C0N299, B5RHI0
    Conserved Domains (1) summary
    pfam09470
    Location:17 → 167
    Telethonin; Telethonin protein
Nucleotide Protein
Heading Accession and Version

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