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VCAN versican [ Canis lupus dingo (dingo) ]

Gene ID: 112653853, updated on 6-Jun-2024

Summary

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Gene symbol
VCAN
Gene description
versican
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See VCAN in Genome Data Viewer
Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 3 NC_064245.1 (24039438..24151593, complement)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 3 Unlocalized Scaffold NW_023365069.1 (24248557..24359597, complement)

Chromosome 3 - NC_064245.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118354288 Neighboring gene hyaluronan and proteoglycan link protein 1 Neighboring gene uncharacterized LOC118354310 Neighboring gene collagen alpha-1(I) chain-like Neighboring gene uncharacterized LOC118354355 Neighboring gene uncharacterized LOC125754839 Neighboring gene X-ray repair cross complementing 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hyaluronic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: versican core protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064245.1 Reference ASM325472v2

    Range
    24039438..24151593 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049108292.1 → XP_048964249.1  LOW QUALITY PROTEIN: versican core protein

    UniProtKB/TrEMBL
    A0A8I3PBG9
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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