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P3H2 prolyl 3-hydroxylase 2 [ Canis lupus dingo (dingo) ]

Gene ID: 112645824, updated on 15-Mar-2024

Summary

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Gene symbol
P3H2
Gene description
prolyl 3-hydroxylase 2
See related
Ensembl:ENSCAFG00020020127
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See P3H2 in Genome Data Viewer
Location:
chromosome: 34
Exon count:
15
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 34 NC_064276.1 (22054188..22204531, complement)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 34 Unlocalized Scaffold NW_023365238.1 (22394404..22544792, complement)

Chromosome 34 - NC_064276.1Genomic Context describing neighboring genes Neighboring gene tumor protein p63 Neighboring gene uncharacterized LOC112646004 Neighboring gene uncharacterized LOC125754311 Neighboring gene uncharacterized LOC112645826

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 3-hydroxylase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064276.1 Reference ASM325472v2

    Range
    22054188..22204531 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025425348.3 → XP_025281133.1  prolyl 3-hydroxylase 2

    UniProtKB/TrEMBL
    A0A8C0L6W3, A0A8C0NYE6, A0A8C0T681, A0A8I3PG73
    Related
    ENSCAFP00020025560.1
    Conserved Domains (2) summary
    smart00702
    Location:473 → 671
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    TIGR03302
    Location:315 → 376
    OM_YfiO; outer membrane assembly lipoprotein YfiO
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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