U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

FMOD fibromodulin [ Canis lupus dingo (dingo) ]

Gene ID: 112643268, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
FMOD
Gene description
fibromodulin
See related
Ensembl:ENSCAFG00020012423
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See FMOD in Genome Data Viewer
Location:
chromosome: 38
Exon count:
3
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 38 NC_064280.1 (586072..596263, complement)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 38 Unlocalized Scaffold NW_023365272.1 (1305773..1315956, complement)

Chromosome 38 - NC_064280.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112643269 Neighboring gene BTG anti-proliferation factor 2 Neighboring gene uncharacterized LOC112643267 Neighboring gene uncharacterized LOC112643266

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
fibromodulin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064280.1 Reference ASM325472v2

    Range
    586072..596263 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025421215.3 → XP_025277000.1  fibromodulin

    UniProtKB/TrEMBL
    A0A8C0N925, A0A8C0QZZ4, A0A8C0SFD8, A0A8I3NYI8, A0A8I3P4B0
    Related
    ENSCAFP00020015462.1
    Conserved Domains (4) summary
    smart00013
    Location:75 → 109
    LRRNT; Leucine rich repeat N-terminal domain
    sd00033
    Location:107 → 130
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:105 → 167
    LRR_8; Leucine rich repeat
    cd21340
    Location:160 → 355
    PPP1R42; protein phosphatase 1 regulatory subunit 42
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.