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PNPLA3 patatin like phospholipase domain containing 3 [ Bubalus bubalis (water buffalo) ]

Gene ID: 112584429, updated on 18-Sep-2024

Summary

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Gene symbol
PNPLA3
Gene description
patatin like phospholipase domain containing 3
See related
EnsemblRapid:ENSBALG00030017439
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See PNPLA3 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
11
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 4 NC_059160.1 (5247232..5272163, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 4 NC_058346.1 (5264896..5289814, complement)

Chromosome 4 - NC_059160.1Genomic Context describing neighboring genes Neighboring gene parvin beta Neighboring gene SAMM50 sorting and assembly machinery component Neighboring gene uncharacterized LOC123333148 Neighboring gene 1-acylglycerol-3-phosphate O-acyltransferase PNPLA3-like Neighboring gene 1-acylglycerol-3-phosphate O-acyltransferase PNPLA3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-acylglycerol-3-phosphate O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-acylglycerol-3-phosphate O-acyltransferase PNPLA3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059160.1 Reference NDDB_SH_1 Primary Assembly

    Range
    5247232..5272163 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044940791.2 → XP_044796726.2  1-acylglycerol-3-phosphate O-acyltransferase PNPLA3 isoform X1

  2. XM_045165229.1 → XP_045021164.1  1-acylglycerol-3-phosphate O-acyltransferase PNPLA3 isoform X4

  3. XM_045165226.1 → XP_045021161.1  1-acylglycerol-3-phosphate O-acyltransferase PNPLA3 isoform X1

    Related
    ENSBALP00030032857.1, ENSBALT00030048854.1

  4. XM_045165227.1 → XP_045021162.1  1-acylglycerol-3-phosphate O-acyltransferase PNPLA3 isoform X2

  5. XM_045165228.1 → XP_045021163.1  1-acylglycerol-3-phosphate O-acyltransferase PNPLA3 isoform X3

Nucleotide Protein
Heading Accession and Version

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