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B3GNT8 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 [ Bubalus bubalis (water buffalo) ]

Gene ID: 112580294, updated on 15-Mar-2024

Summary

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Gene symbol
B3GNT8
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8
See related
EnsemblRapid:ENSBALG00030029465
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See B3GNT8 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
5
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 18 NC_059174.1 (49897340..49907936, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 18 NC_058360.1 (50561112..50571708, complement)

Chromosome 18 - NC_059174.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 91 Neighboring gene exosome component 5 Neighboring gene branched chain keto acid dehydrogenase E1 subunit alpha Neighboring gene uncharacterized LOC123330124 Neighboring gene uncharacterized LOC123465099 Neighboring gene distal membrane arm assembly component 2 Neighboring gene glutamate rich 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059174.1 Reference NDDB_SH_1 Primary Assembly

    Range
    49897340..49907936 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044930690.1 → XP_044786625.1  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8

    Conserved Domains (1) summary
    cl21608
    Location:163 → 350
    Galactosyl_T; Galactosyltransferase

  2. XM_044930689.1 → XP_044786624.1  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8

    Related
    ENSBALP00030054728.1, ENSBALT00030081735.1
    Conserved Domains (1) summary
    cl21608
    Location:163 → 350
    Galactosyl_T; Galactosyltransferase

  3. XM_044930688.1 → XP_044786623.1  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8

    Related
    ENSBALP00030054720.1, ENSBALT00030081724.1
    Conserved Domains (1) summary
    cl21608
    Location:163 → 350
    Galactosyl_T; Galactosyltransferase

RNA

  1. XR_006545792.1 RNA Sequence

  2. XR_006545793.1 RNA Sequence

  3. XR_006545795.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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