U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CD248 CD248 molecule [ Alligator sinensis (Chinese alligator) ]

Gene ID: 112551415, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CD248
Gene description
CD248 molecule
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CD248 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842460.1 (103966..108405)

NW_005842460.1Genomic Context describing neighboring genes Neighboring gene cathepsin W-like Neighboring gene cathepsin W-like Neighboring gene mitochondrial ribosomal protein L11 Neighboring gene neuronal PAS domain protein 4

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005842460 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
endosialin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842460.1 Reference ASM45574v1 Primary Assembly

    Range
    103966..108405
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025212391.1 → XP_025068176.1  endosialin

    UniProtKB/TrEMBL
    A0A3Q0H7Z2
    Conserved Domains (4) summary
    smart00179
    Location:316 → 344
    EGF_CA; Calcium-binding EGF-like domain
    pfam12662
    Location:296 → 319
    cEGF; Complement Clr-like EGF-like
    pfam14670
    Location:367 → 395
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl02432
    Location:26 → 164
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.