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LOC112512482 methyltransferase-like protein 23 [ Cynara cardunculus subsp. cardunculus ]

Gene ID: 112512482, updated on 28-Jun-2024

Summary

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Gene symbol
LOC112512482
Gene description
methyltransferase-like protein 23
Locus tag
Ccrd_018788
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynara cardunculus subsp. cardunculus (sub-species: cardunculus)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara
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Genomic context

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See LOC112512482 in Genome Data Viewer
Location:
chromosome: LG 5
Exon count:
9
Annotation release Status Assembly Chr Location
100 current CcrdV1 (GCF_001531365.1) LG 5 NC_037532.1 (29452723..29465240, complement)

Chromosome LG 5 - NC_037532.1Genomic Context describing neighboring genes Neighboring gene transcription factor MYB10-like Neighboring gene uncharacterized LOC112513722 Neighboring gene peroxidase 64-like Neighboring gene uncharacterized LOC112512970 Neighboring gene uncharacterized LOC112513603

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037532.1 Chromosome LG 5 Reference CcrdV1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methyltransferase-like protein 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynara cardunculus subsp. cardunculus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CcrdV1

Genomic

  1. NC_037532.1 Reference CcrdV1

    Range
    29452723..29465240 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025118470.1 → XP_024974238.1  methyltransferase-like protein 23 isoform X2

    Conserved Domains (1) summary
    cl17173
    Location:37 → 169
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. XM_025118467.1 → XP_024974235.1  methyltransferase-like protein 23 isoform X1

    UniProtKB/TrEMBL
    A0A103Y5J4
    Conserved Domains (1) summary
    cl17173
    Location:37 → 186
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  3. XM_025118469.1 → XP_024974237.1  methyltransferase-like protein 23 isoform X1

    UniProtKB/TrEMBL
    A0A103Y5J4
    Conserved Domains (1) summary
    cl17173
    Location:37 → 186
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
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