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LOC112436399 uncharacterized LOC112436399 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 112436399, updated on 21-Dec-2023

Summary

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Gene symbol
LOC112436399
Gene description
uncharacterized LOC112436399
See related
Ensembl:ENSMZEG00005020282
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
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Genomic context

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See LOC112436399 in Genome Data Viewer
Location:
chromosome: LG18
Exon count:
2
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG18 NC_036797.1 (1187966..1201783)

Linkage Group LG18 - NC_036797.1Genomic Context describing neighboring genes Neighboring gene neoverrucotoxin subunit alpha-like Neighboring gene uncharacterized LOC112436407 Neighboring gene uncharacterized LOC101470575 Neighboring gene solute carrier family 39 member 6 Neighboring gene uncharacterized LOC106674801

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036797.1 Chromosome LG18 Reference M_zebra_UMD2a Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC112436399

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036797.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    1187966..1201783
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024805952.1 → XP_024661720.1  uncharacterized protein LOC112436399

    UniProtKB/TrEMBL
    A0A3P9CZD6
    Related
    ENSMZEP00005027186.1, ENSMZET00005028056.1
    Conserved Domains (3) summary
    cd00063
    Location:503 → 584
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl21455
    Location:750 → 829
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    cl25602
    Location:1115 → 1222
    DUF3552; Domain of unknown function (DUF3552)
Nucleotide Protein
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