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POGLUT1 protein O-glucosyltransferase 1 [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112413462, updated on 15-Mar-2024

Summary

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Gene symbol
POGLUT1
Gene description
protein O-glucosyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Orthologs
human mouse all
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Genomic context

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See POGLUT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020171810.1 (235234..258700, complement)

NW_020171810.1Genomic Context describing neighboring genes Neighboring gene ADP-ribosylarginine hydrolase Neighboring gene CD80 molecule Neighboring gene translocase of inner mitochondrial membrane domain containing 1 Neighboring gene transmembrane protein 39A Neighboring gene Rho GTPase activating protein 31

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020171810 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-glucosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020171810.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    235234..258700 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024765553.1 → XP_024621321.1  protein O-glucosyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A341D2U5
    Conserved Domains (1) summary
    cl23835
    Location:49 → 341
    Glyco_transf_90; Glycosyl transferase family 90

  2. XM_024765445.1 → XP_024621213.1  protein O-glucosyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A341D2L6
    Conserved Domains (1) summary
    pfam05686
    Location:49 → 388
    Glyco_transf_90; Glycosyl transferase family 90

RNA

  1. XR_003005993.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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