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AFMID arylformamidase [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112410441, updated on 15-Mar-2024

Summary

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Gene symbol
AFMID
Gene description
arylformamidase
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Orthologs
human mouse all
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Genomic context

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See AFMID in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020174923.1 (9112828..9134772)

NW_020174923.1Genomic Context describing neighboring genes Neighboring gene transmembrane channel like 8 Neighboring gene chromosome unknown C17orf99 homolog Neighboring gene synaptogyrin 2 Neighboring gene thymidine kinase 1 Neighboring gene baculoviral IAP repeat containing 5 Neighboring gene transmembrane protein 235

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020174923 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arylformamidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tryptophan catabolic process to kynurenine IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kynurenine formamidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020174923.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    9112828..9134772
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024761079.1 → XP_024616847.1  kynurenine formamidase isoform X1

    UniProtKB/TrEMBL
    A0A341CSP2
    Conserved Domains (1) summary
    COG0657
    Location:49 → 297
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]

  2. XM_024761080.1 → XP_024616848.1  kynurenine formamidase isoform X2

    UniProtKB/TrEMBL
    A0A341CQ01
    Conserved Domains (1) summary
    COG0657
    Location:26 → 280
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]

  3. XM_024761082.1 → XP_024616850.1  kynurenine formamidase isoform X4

    UniProtKB/TrEMBL
    A0A341CR93
    Conserved Domains (1) summary
    COG0657
    Location:26 → 280
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]

  4. XM_024761081.1 → XP_024616849.1  kynurenine formamidase isoform X3

    UniProtKB/TrEMBL
    A0A341CQ73
    Conserved Domains (1) summary
    COG0657
    Location:43 → 297
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]

  5. XM_024761083.1 → XP_024616851.1  kynurenine formamidase isoform X5

    UniProtKB/TrEMBL
    A0A341CPY7
    Conserved Domains (1) summary
    COG0657
    Location:26 → 280
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]

  6. XM_024761084.1 → XP_024616852.1  kynurenine formamidase isoform X6

    UniProtKB/TrEMBL
    A0A341CSP7
    Conserved Domains (1) summary
    COG0657
    Location:5 → 172
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
Nucleotide Protein
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