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PDE9A phosphodiesterase 9A [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112408659, updated on 15-Mar-2024

Summary

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Gene symbol
PDE9A
Gene description
phosphodiesterase 9A
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Orthologs
human mouse all
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Genomic context

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See PDE9A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020174642.1 (10533905..10615234)

NW_020174642.1Genomic Context describing neighboring genes Neighboring gene radial spoke head component 1 Neighboring gene solute carrier family 37 member 1 Neighboring gene U6 spliceosomal RNA Neighboring gene WD repeat domain 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020174642 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020174642.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    10533905..10615234
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024758404.1 → XP_024614172.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X1

    UniProtKB/TrEMBL
    A0A341CJT2
    Conserved Domains (1) summary
    pfam00233
    Location:232 → 460
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  2. XM_024758405.1 → XP_024614173.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X2

    UniProtKB/TrEMBL
    A0A341CHZ4
    Conserved Domains (1) summary
    pfam00233
    Location:232 → 460
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  3. XM_024758406.1 → XP_024614174.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X3

    UniProtKB/TrEMBL
    A0A341CHS8
    Conserved Domains (1) summary
    pfam00233
    Location:221 → 437
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
Nucleotide Protein
Heading Accession and Version

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