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PRG2 proteoglycan 2, pro eosinophil major basic protein [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112402495, updated on 15-Mar-2024

Summary

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Gene symbol
PRG2
Gene description
proteoglycan 2, pro eosinophil major basic protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Orthologs
human mouse all
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Genomic context

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See PRG2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020173674.1 (11845721..11848057)

NW_020173674.1Genomic Context describing neighboring genes Neighboring gene reticulon 4 receptor like 2 Neighboring gene solute carrier family 43 member 3 Neighboring gene proteoglycan 3, pro eosinophil major basic protein 2 Neighboring gene purinergic receptor P2X 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020173674 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: bone marrow proteoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020173674.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    11845721..11848057
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024749476.1 → XP_024605244.1  LOW QUALITY PROTEIN: bone marrow proteoglycan

    UniProtKB/TrEMBL
    A0A341BSR3
    Conserved Domains (1) summary
    cl02432
    Location:114 → 212
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

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