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LMAN2L lectin, mannose binding 2 like [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112399062, updated on 19-Jun-2024

Summary

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Gene symbol
LMAN2L
Gene description
lectin, mannose binding 2 like
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Orthologs
human mouse all
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Genomic context

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See LMAN2L in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020173116.1 (7758580..7798400, complement)

NW_020173116.1Genomic Context describing neighboring genes Neighboring gene KAT8 regulatory NSL complex subunit 3 Neighboring gene fer-1 like family member 5 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 4 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020173116 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020173116.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    7758580..7798400 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024744034.1 → XP_024599802.1  VIP36-like protein isoform X5

    UniProtKB/TrEMBL
    A0A341BCA1
    Conserved Domains (1) summary
    cl14058
    Location:1 → 160
    lectin_L-type; legume lectins

  2. XM_024744029.1 → XP_024599797.1  VIP36-like protein isoform X1

    UniProtKB/TrEMBL
    A0A341BDP2
    Conserved Domains (1) summary
    cl14058
    Location:50 → 298
    lectin_L-type; legume lectins

  3. XM_024744031.1 → XP_024599799.1  VIP36-like protein isoform X3

    UniProtKB/TrEMBL
    A0A341BC97
    Conserved Domains (1) summary
    cl14058
    Location:18 → 254
    lectin_L-type; legume lectins

  4. XM_024744032.1 → XP_024599800.1  VIP36-like protein isoform X4

    UniProtKB/TrEMBL
    A0A341BAL5
    Conserved Domains (1) summary
    cl14058
    Location:50 → 244
    lectin_L-type; legume lectins

  5. XM_024744030.1 → XP_024599798.1  VIP36-like protein isoform X2

    UniProtKB/TrEMBL
    A0A341BDN9
    Conserved Domains (1) summary
    cl14058
    Location:50 → 298
    lectin_L-type; legume lectins

  6. XM_024744033.1 → XP_024599801.1  VIP36-like protein isoform X5

    UniProtKB/TrEMBL
    A0A341BCA1
    Conserved Domains (1) summary
    cl14058
    Location:1 → 160
    lectin_L-type; legume lectins

  7. XM_024744036.1 → XP_024599804.1  VIP36-like protein isoform X5

    UniProtKB/TrEMBL
    A0A341BCA1
    Conserved Domains (1) summary
    cl14058
    Location:1 → 160
    lectin_L-type; legume lectins

  8. XM_024744035.1 → XP_024599803.1  VIP36-like protein isoform X5

    UniProtKB/TrEMBL
    A0A341BCA1
    Conserved Domains (1) summary
    cl14058
    Location:1 → 160
    lectin_L-type; legume lectins
Nucleotide Protein
Heading Accession and Version

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