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CHST13 carbohydrate sulfotransferase 13 [ Desmodus rotundus (common vampire bat) ]

Gene ID: 112322634, updated on 30-Mar-2024

Summary

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Gene symbol
CHST13
Gene description
carbohydrate sulfotransferase 13
Gene type
protein coding
RefSeq status
MODEL
Organism
Desmodus rotundus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Desmodontinae; Desmodus
Orthologs
human mouse all
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Genomic context

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See CHST13 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_02 current HLdesRot8A (GCF_022682495.1) 10 NC_071396.1 (60177948..60239871, complement)
101 previous assembly ASM294091v2 (GCF_002940915.1) Unplaced Scaffold NW_020093872.1 (54113453..54156186)

Chromosome 10 - NC_071396.1Genomic Context describing neighboring genes Neighboring gene thioredoxin reductase 3 Neighboring gene elongation factor 1-gamma-like Neighboring gene chromosome 10 C11orf98 homolog Neighboring gene bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase-like Neighboring gene urocanate hydratase 1 Neighboring gene ZXD family zinc finger C Neighboring gene cilia and flagella associated protein 100

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022682495.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HLdesRot8A Primary Assembly

Genomic

  1. NC_071396.1 Reference HLdesRot8A Primary Assembly

    Range
    60177948..60239871 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053913376.1 → XP_053769351.1  carbohydrate sulfotransferase 13

RNA

  1. XR_008425421.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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