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ORMDL2 ORMDL sphingolipid biosynthesis regulator 2 [ Desmodus rotundus (common vampire bat) ]

Gene ID: 112319095, updated on 19-Jun-2024

Summary

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Gene symbol
ORMDL2
Gene description
ORMDL sphingolipid biosynthesis regulator 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Desmodus rotundus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Desmodontinae; Desmodus
Orthologs
human mouse all
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Genomic context

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See ORMDL2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_02 current HLdesRot8A (GCF_022682495.1) 3 NC_071389.1 (148817926..148820169, complement)
101 previous assembly ASM294091v2 (GCF_002940915.1) Unplaced Scaffold NW_020093622.1 (14883938..14886075, complement)

Chromosome 3 - NC_071389.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 198 Neighboring gene DnaJ heat shock protein family (Hsp40) member C14 Neighboring gene SAP domain containing ribonucleoprotein Neighboring gene 60S ribosomal protein L19-like Neighboring gene eukaryotic peptide chain release factor subunit 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular sphingolipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ORM1-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022682495.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HLdesRot8A Primary Assembly

Genomic

  1. NC_071389.1 Reference HLdesRot8A Primary Assembly

    Range
    148817926..148820169 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024576336.3 → XP_024432104.1  ORM1-like protein 2

    Conserved Domains (1) summary
    pfam04061
    Location:11 → 146
    ORMDL; ORMDL family

  2. XM_045184783.2 → XP_045040718.1  ORM1-like protein 2

    Conserved Domains (1) summary
    pfam04061
    Location:11 → 146
    ORMDL; ORMDL family
Nucleotide Protein
Heading Accession and Version

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