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CS citrate synthase [ Desmodus rotundus (common vampire bat) ]

Gene ID: 112319041, updated on 30-Mar-2024

Summary

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Gene symbol
CS
Gene description
citrate synthase
Gene type
protein coding
RefSeq status
MODEL
Organism
Desmodus rotundus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Desmodontinae; Desmodus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current HLdesRot8A (GCF_022682495.1) 3 NC_071389.1 (148429865..148454915)
101 previous assembly ASM294091v2 (GCF_002940915.1) Unplaced Scaffold NW_020093622.1 (14486299..14511349)

Chromosome 3 - NC_071389.1Genomic Context describing neighboring genes Neighboring gene poly(A) specific ribonuclease subunit PAN2 Neighboring gene canopy FGF signaling regulator 2 Neighboring gene coenzyme Q10A Neighboring gene ankyrin repeat domain 52 Neighboring gene solute carrier family 39 member 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables citrate (Si)-synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in citrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
citrate synthase, mitochondrial
Names
Putative citrate synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022682495.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HLdesRot8A Primary Assembly

Genomic

  1. NC_071389.1 Reference HLdesRot8A Primary Assembly

    Range
    148429865..148454915
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024576257.3 → XP_024432025.1  citrate synthase, mitochondrial

    UniProtKB/TrEMBL
    K9IL37
    Conserved Domains (1) summary
    cd06105
    Location:33 → 459
    ScCit1-2_like; Saccharomyces cerevisiae (Sc) citrate synthases Cit1-2_like. Citrate synthases (CS) catalyzes the condensation of acetyl coenzyme A (AcCoA) with oxaloacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the citric acid cycle (TCA or ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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