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ACER3 alkaline ceramidase 3 [ Desmodus rotundus (common vampire bat) ]

Gene ID: 112315900, updated on 18-Sep-2024

Summary

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Gene symbol
ACER3
Gene description
alkaline ceramidase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Desmodus rotundus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Desmodontinae; Desmodus
Orthologs
human mouse all
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Genomic context

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See ACER3 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current HLdesRot8A (GCF_022682495.1) 5 NC_071391.1 (49738215..49838643)
101 previous assembly ASM294091v2 (GCF_002940915.1) Unplaced Scaffold NW_020093486.1 (10993212..11058287, complement)

Chromosome 5 - NC_071391.1Genomic Context describing neighboring genes Neighboring gene guanylate cyclase D-like Neighboring gene uncharacterized LOC123477910 Neighboring gene tsukushi, small leucine rich proteoglycan Neighboring gene calpain 5 Neighboring gene olfactory marker protein Neighboring gene myosin VIIA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phytosphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkaline ceramidase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022682495.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HLdesRot8A Primary Assembly

Genomic

  1. NC_071391.1 Reference HLdesRot8A Primary Assembly

    Range
    49738215..49838643
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053924193.1 → XP_053780168.1  alkaline ceramidase 3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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