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DAG1 dystroglycan 1 [ Desmodus rotundus (common vampire bat) ]

Gene ID: 112309526, updated on 30-Mar-2024

Summary

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Gene symbol
DAG1
Gene description
dystroglycan 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Desmodus rotundus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Desmodontinae; Desmodus
Orthologs
human mouse all
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Genomic context

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See DAG1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current HLdesRot8A (GCF_022682495.1) 8 NC_071394.1 (130660653..130726004)
101 previous assembly ASM294091v2 (GCF_002940915.1) Unplaced Scaffold NW_020093099.1 (31525497..31601014)

Chromosome 8 - NC_071394.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA16B/SNORA16A family Neighboring gene nicolin 1, tubulin polyglutamylase complex subunit Neighboring gene bassoon presynaptic cytomatrix protein Neighboring gene acylaminoacyl-peptide hydrolase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables laminin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in morphogenesis of an epithelium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in muscle attachment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nerve development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of dystroglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of dystrophin-associated glycoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dystroglycan 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022682495.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HLdesRot8A Primary Assembly

Genomic

  1. NC_071394.1 Reference HLdesRot8A Primary Assembly

    Range
    130660653..130726004
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045200192.2 → XP_045056127.2  dystroglycan 1

  2. XM_045200193.2 → XP_045056128.2  dystroglycan 1

  3. XM_024565702.3 → XP_024421470.2  dystroglycan 1

  4. XM_024565704.3 → XP_024421472.2  dystroglycan 1

  5. XM_053929242.1 → XP_053785217.1  dystroglycan 1

  6. XM_053929241.1 → XP_053785216.1  dystroglycan 1

  7. XM_045200188.2 → XP_045056123.2  dystroglycan 1

  8. XM_045200189.2 → XP_045056124.2  dystroglycan 1

  9. XM_045200190.2 → XP_045056125.2  dystroglycan 1

  10. XM_045200191.2 → XP_045056126.2  dystroglycan 1

Nucleotide Protein
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Gene LinkOut

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