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ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [ Desmodus rotundus (common vampire bat) ]

Gene ID: 112302602, updated on 30-Mar-2024

Summary

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Gene symbol
ST3GAL6
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Desmodus rotundus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Desmodontinae; Desmodus
Orthologs
human mouse all
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Genomic context

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See ST3GAL6 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_02 current HLdesRot8A (GCF_022682495.1) 2 NC_071388.1 (79965442..80062717, complement)
101 previous assembly ASM294091v2 (GCF_002940915.1) Unplaced Scaffold NW_020091235.1 (18703371..18800671, complement)

Chromosome 2 - NC_071388.1Genomic Context describing neighboring genes Neighboring gene U4 spliceosomal RNA Neighboring gene discoidin, CUB and LCCL domain containing 2 Neighboring gene E3 ubiquitin-protein ligase KCMF1-like Neighboring gene PRELI domain containing protein 3B-like Neighboring gene rRNA-processing protein FCF1 homolog Neighboring gene uncharacterized LOC112302595

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type 2 lactosamine alpha-2,3-sialyltransferase
Names
Putative glycosyltransferase family 29

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022682495.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HLdesRot8A Primary Assembly

Genomic

  1. NC_071388.1 Reference HLdesRot8A Primary Assembly

    Range
    79965442..80062717 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024558182.3 → XP_024413950.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X2

    UniProtKB/TrEMBL
    K9IIH7
    Conserved Domains (1) summary
    pfam00777
    Location:77 → 299
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_024558180.3 → XP_024413948.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    K9IIT1
    Conserved Domains (1) summary
    pfam00777
    Location:85 → 318
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_024558181.3 → XP_024413949.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    K9IIT1
    Conserved Domains (1) summary
    pfam00777
    Location:85 → 318
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_024558179.3 → XP_024413947.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    K9IIT1
    Conserved Domains (1) summary
    pfam00777
    Location:85 → 318
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  5. XM_045193561.2 → XP_045049496.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    K9IIT1
    Conserved Domains (1) summary
    pfam00777
    Location:85 → 318
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

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