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OGT O-linked N-acetylglucosamine (GlcNAc) transferase [ Desmodus rotundus (common vampire bat) ]

Gene ID: 112300108, updated on 30-Mar-2024

Summary

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Gene symbol
OGT
Gene description
O-linked N-acetylglucosamine (GlcNAc) transferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Desmodus rotundus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Desmodontinae; Desmodus
Orthologs
human mouse all
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Genomic context

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See OGT in Genome Data Viewer
Location:
chromosome: X
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_02 current HLdesRot8A (GCF_022682495.1) X NC_071400.1 (8438564..8488735)
101 previous assembly ASM294091v2 (GCF_002940915.1) Unplaced Scaffold NW_020090905.1 (6536027..6586357, complement)

Chromosome X - NC_071400.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123479221 Neighboring gene suppressor of cytokine signaling 6-like Neighboring gene germ cell nuclear acidic peptidase Neighboring gene C-X-C motif chemokine receptor 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit
Names
Putative o-linked n-acetylglucosamine transferase ogt

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022682495.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HLdesRot8A Primary Assembly

Genomic

  1. NC_071400.1 Reference HLdesRot8A Primary Assembly

    Range
    8438564..8488735
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024555300.3 → XP_024411068.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X1

    Conserved Domains (3) summary
    sd00006
    Location:327 → 355
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:556 → 1023
    Glyco_transf_41; Glycosyl transferase family 41
    cl26002
    Location:22 → 465
    TPR_11; TPR repeat

  2. XM_024555301.3 → XP_024411069.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X2

    Conserved Domains (3) summary
    sd00006
    Location:317 → 345
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:546 → 1013
    Glyco_transf_41; Glycosyl transferase family 41
    cl26002
    Location:23 → 455
    TPR_11; TPR repeat

RNA

  1. XR_008425973.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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