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HEXD hexosaminidase D [ Desmodus rotundus (common vampire bat) ]

Gene ID: 112298818, updated on 30-Mar-2024

Summary

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Gene symbol
HEXD
Gene description
hexosaminidase D
Gene type
protein coding
RefSeq status
MODEL
Organism
Desmodus rotundus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Desmodontinae; Desmodus
Also known as
HEXDC
Orthologs
human mouse all
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Genomic context

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See HEXD in Genome Data Viewer
Location:
chromosome: 9
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_02 current HLdesRot8A (GCF_022682495.1) 9 NC_071395.1 (113404867..113415982)
101 previous assembly ASM294091v2 (GCF_002940915.1) Unplaced Scaffold NW_020090860.1 (9039340..9050521)

Chromosome 9 - NC_071395.1Genomic Context describing neighboring genes Neighboring gene urotensin 2 receptor Neighboring gene 2-oxoglutarate and iron dependent oxygenase domain containing 3 Neighboring gene cytochrome b-245 chaperone 1 Neighboring gene uncharacterized LOC123479070

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hexosaminidase D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022682495.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HLdesRot8A Primary Assembly

Genomic

  1. NC_071395.1 Reference HLdesRot8A Primary Assembly

    Range
    113404867..113415982
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024553935.3 → XP_024409703.1  hexosaminidase D

    Conserved Domains (2) summary
    cd06565
    Location:36 → 350
    GH20_GcnA-like; Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine ...
    cl22883
    Location:341 → 498
    Bac_GDH; Bacterial NAD-glutamate dehydrogenase

RNA

  1. XR_006654562.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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