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DSE dermatan sulfate epimerase [ Desmodus rotundus (common vampire bat) ]

Gene ID: 112297030, updated on 30-Mar-2024

Summary

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Gene symbol
DSE
Gene description
dermatan sulfate epimerase
Gene type
protein coding
RefSeq status
MODEL
Organism
Desmodus rotundus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Desmodontinae; Desmodus
Orthologs
human mouse all
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Genomic context

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See DSE in Genome Data Viewer
Location:
chromosome: 11
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current HLdesRot8A (GCF_022682495.1) 11 NC_071397.1 (67306663..67368311)
101 previous assembly ASM294091v2 (GCF_002940915.1) Unplaced Scaffold NW_020090638.1 (24279427..24372196)

Chromosome 11 - NC_071397.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128779526 Neighboring gene uncharacterized LOC128779527 Neighboring gene calcium homeostasis modulator family member 6 Neighboring gene trafficking protein particle complex subunit 3L Neighboring gene calcium homeostasis modulator family member 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chondroitin-glucuronate 5-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dermatan sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dermatan-sulfate epimerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022682495.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HLdesRot8A Primary Assembly

Genomic

  1. NC_071397.1 Reference HLdesRot8A Primary Assembly

    Range
    67306663..67368311
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053914121.1 → XP_053770096.1  dermatan-sulfate epimerase isoform X2

  2. XM_045188697.2 → XP_045044632.2  dermatan-sulfate epimerase isoform X1

  3. XM_045188698.2 → XP_045044633.2  dermatan-sulfate epimerase isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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